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Overview of the Pathway Curation (PC) task of BioNLP Shared Task 2013
Tomoko Ohta
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Sampo Pyysalo
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Rafal Rak
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Andrew Rowley
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Hong-Woo Chun
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Sung-Jae Jung
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Sung-Pil Choi
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Sophia Ananiadou
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Jun’ichi Tsujii
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Paper Details:
Month: August
Year: 2013
Location: Sofia, Bulgaria
Venue:
BioNLP |
WS |
Citations
URL
A Domain-independent Rule-based Framework for Event Extraction
Marco A. Valenzuela-Escárcega
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Gus Hahn-Powell
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Mihai Surdeanu
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Thomas Hicks
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TEES 2.1: Automated Annotation Scheme Learning in the BioNLP 2013 Shared Task
Jari Björne
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Tapio Salakoski
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NaCTeM EventMine for BioNLP 2013 CG and PC tasks
Makoto Miwa
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Sophia Ananiadou
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CoMAGD: Annotation of Gene-Depression Relations
Rize Jin
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Jinseon You
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Jin-Woo Chung
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Hee-Jin Lee
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Maria Wolters
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Jong Park
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Measuring the State of the Art of Automated Pathway Curation Using Graph Algorithms - A Case Study of the mTOR Pathway
Michael Spranger
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Sucheendra Palaniappan
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Samik Gosh
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Cancer Hallmark Text Classification Using Convolutional Neural Networks
Simon Baker
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Anna Korhonen
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Sampo Pyysalo
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External Evaluation of Event Extraction Classifiers for Automatic Pathway Curation: An extended study of the mTOR pathway
Wojciech Kusa
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Michael Spranger
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Initializing neural networks for hierarchical multi-label text classification
Simon Baker
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Anna Korhonen
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Biomedical Event Trigger Identification Using Bidirectional Recurrent Neural Network Based Models
Rahul V S S Patchigolla
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Sunil Sahu
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Ashish Anand
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http://2013.bionlp-st.org/
http://www.ebi.ac.uk/sbo/main/
http://www.pantherdb.org/pathway/
http://www.ebi.ac.uk/biomodels-main/
http://nactem.ac.uk/pathtext/
http://nersuite.nlplab.org/
http://nactem.ac.uk/EventMine/
http://jbjorne.github.io/TEES/
http://2013.bionlp-st.org/
Field Of Study
Linguistic Trends
Ontologies
Syntax
Task
Tagging
Named Entity Recognition
Information Extraction
Biomedical
Language
English
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