HyperCore: Hyperbolic and Co-graph Representation for Automatic ICD Coding ACL-2020

Extensive Error Analysis and a Learning-Based Evaluation of Medical Entity Recognition Systems to Approximate User Experience ACL-2020 BioNLP-2020 WS-2020

Comparative Analysis of Text Classification Approaches in Electronic Health Records ACL-2020 BioNLP-2020 WS-2020

Improving the Identification of the Discourse Function of News Article Paragraphs ACL-2020 NUSE-2020 WS-2020

An Empirical Study of Multi-Task Learning on BERT for Biomedical Text Mining ACL-2020 BioNLP-2020 WS-2020

Clinical Concept Linking with Contextualized Neural Representations ACL-2020

Domain Adaptation and Instance Selection for Disease Syndrome Classification over Veterinary Clinical Notes ACL-2020 BioNLP-2020 WS-2020

Rationalizing Medical Relation Prediction from Corpus-level Statistics ACL-2020

Entity-Enriched Neural Models for Clinical Question Answering ACL-2020 BioNLP-2020 WS-2020

Clinical Reading Comprehension: A Thorough Analysis of the emrQA Dataset ACL-2020

A Generate-and-Rank Framework with Semantic Type Regularization for Biomedical Concept Normalization ACL-2020

An Effective Transition-based Model for Discontinuous NER ACL-2020

Clinical-Coder: Assigning Interpretable ICD-10 Codes to Chinese Clinical Notes ACL-2020

Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics ACL-2020

Noise Pollution in Hospital Readmission Prediction: Long Document Classification with Reinforcement Learning ACL-2020 BioNLP-2020 WS-2020

Towards Visual Dialog for Radiology ACL-2020 BioNLP-2020 WS-2020

Attend to Medical Ontologies: Content Selection for Clinical Abstractive Summarization ACL-2020

BENTO: A Visual Platform for Building Clinical NLP Pipelines Based on CodaLab ACL-2020

SUPP.AI: finding evidence for supplement-drug interactions ACL-2020

Experimental Evaluation and Development of a Silver-Standard for the MIMIC-III Clinical Coding Dataset ACL-2020 BioNLP-2020 WS-2020

MedCATTrainer: A Biomedical Free Text Annotation Interface with Active Learning and Research Use Case Specific Customisation EMNLP-2019

Coherence-Based Modeling of Clinical Concepts Inferred from Heterogeneous Clinical Notes for ICU Patient Risk Stratification CoNLL-2019

Distributed Knowledge Based Clinical Auto-Coding System ACL-2019

Classifying the reported ability in clinical mobility descriptions ACL-2019 WS-2019

RDoC Task at BioNLP-OST 2019 EMNLP-2019 WS-2019

REflex: Flexible Framework for Relation Extraction in Multiple Domains ACL-2019 WS-2019

A Benchmark Corpus of English Misspellings and a Minimally-supervised Model for Spelling Correction ACL-2019 WS-2019

Transfer Learning in Biomedical Natural Language Processing: An Evaluation of BERT and ELMo on Ten Benchmarking Datasets ACL-2019 WS-2019

BioReddit: Word Embeddings for User-Generated Biomedical NLP EMNLP-2019 WS-2019

Extracting Symptoms and their Status from Clinical Conversations ACL-2019

Joint Entity Extraction and Assertion Detection for Clinical Text ACL-2019

Combining Structured and Free-text Electronic Medical Record Data for Real-time Clinical Decision Support ACL-2019 WS-2019

Identification of Adverse Drug Reaction Mentions in Tweets – SMM4H Shared Task 2019 ACL-2019 WS-2019

BioNLP-OST 2019 RDoC Tasks: Multi-grain Neural Relevance Ranking Using Topics and Attention Based Query-Document-Sentence Interactions EMNLP-2019 WS-2019

Leveraging SNOMED CT terms and relations for machine translation of clinical texts from Basque to Spanish WS-2019

Medical Word Embeddings for Spanish: Development and Evaluation NAACL-2019 WS-2019

Distinguishing Clinical Sentiment: The Importance of Domain Adaptation in Psychiatric Patient Health Records NAACL-2019 WS-2019

Sieg at MEDIQA 2019: Multi-task Neural Ensemble for Biomedical Inference and Entailment ACL-2019 WS-2019

UW-BHI at MEDIQA 2019: An Analysis of Representation Methods for Medical Natural Language Inference ACL-2019 WS-2019

Attention Neural Model for Temporal Relation Extraction NAACL-2019 WS-2019

ScispaCy: Fast and Robust Models for Biomedical Natural Language Processing ACL-2019 WS-2019

Deep Contextualized Biomedical Abbreviation Expansion ACL-2019 WS-2019

Publicly Available Clinical BERT Embeddings NAACL-2019 WS-2019

Two-stage Federated Phenotyping and Patient Representation Learning ACL-2019 WS-2019

Annotating and Characterizing Clinical Sentences with Explicit Why-QA Cues NAACL-2019 WS-2019

Experiments with ad hoc ambiguous abbreviation expansion EMNLP-2019 WS-2019

Using Contextual Representations for Suicide Risk Assessment from Internet Forums NAACL-2019 WS-2019

Extracting relevant information from physician-patient dialogues for automated clinical note taking EMNLP-2019 WS-2019

An Analysis of Attention over Clinical Notes for Predictive Tasks NAACL-2019 WS-2019

Towards Automatic Generation of Shareable Synthetic Clinical Notes Using Neural Language Models NAACL-2019 WS-2019

Relation Extraction using Explicit Context Conditioning NAACL-2019

NLP Whack-A-Mole: Challenges in Cross-Domain Temporal Expression Extraction NAACL-2019

Building a De-identification System for Real Swedish Clinical Text Using Pseudonymised Clinical Text EMNLP-2019 WS-2019

Fast Prototyping a Dialogue Comprehension System for Nurse-Patient Conversations on Symptom Monitoring NAACL-2019

Automatic rubric-based content grading for clinical notes EMNLP-2019 WS-2019

Clinical Concept Extraction for Document-Level Coding ACL-2019 WS-2019

Leveraging Medical Literature for Section Prediction in Electronic Health Records EMNLP-2019

Analysing Representations of Memory Impairment in a Clinical Notes Classification Model ACL-2019 WS-2019

Writing habits and telltale neighbors: analyzing clinical concept usage patterns with sublanguage embeddings EMNLP-2019 WS-2019

Learning to Infer Entities, Properties and their Relations from Clinical Conversations EMNLP-2019

Leveraging Hierarchical Category Knowledge for Data-Imbalanced Multi-Label Diagnostic Text Understanding EMNLP-2019 WS-2019

A Joint Named-Entity Recognizer for Heterogeneous Tag-sets Using a Tag Hierarchy ACL-2019

NLNDE: Enhancing Neural Sequence Taggers with Attention and Noisy Channel for Robust Pharmacological Entity Detection EMNLP-2019 WS-2019

KU_ai at MEDIQA 2019: Domain-specific Pre-training and Transfer Learning for Medical NLI ACL-2019 WS-2019

Recognizing UMLS Semantic Types with Deep Learning EMNLP-2019 WS-2019

Assessing the Efficacy of Clinical Sentiment Analysis and Topic Extraction in Psychiatric Readmission Risk Prediction EMNLP-2019 WS-2019

Towards Extracting Medical Family History from Natural Language Interactions: A New Dataset and Baselines EMNLP-2019

Trigger Word Detection and Thematic Role Identification via BERT and Multitask Learning EMNLP-2019 WS-2019

Overview of the MEDIQA 2019 Shared Task on Textual Inference, Question Entailment and Question Answering ACL-2019 WS-2019

Lexical Normalization of User-Generated Medical Text ACL-2019 WS-2019

Saama Research at MEDIQA 2019: Pre-trained BioBERT with Attention Visualisation for Medical Natural Language Inference ACL-2019 WS-2019

Neural Token Representations and Negation and Speculation Scope Detection in Biomedical and General Domain Text EMNLP-2019 WS-2019

evision PDF of 'A Novel System for Extractive Clinical Note Summarization using EHR Data NAACL-2019 WS-2019

Using Clinical Notes with Time Series Data for ICU Management EMNLP-2019

Contributions to Clinical Named Entity Recognition in Portuguese ACL-2019 WS-2019

Clinical Case Reports for NLP ACL-2019 WS-2019

Annotating Temporal Information in Clinical Notes for Timeline Reconstruction: Towards the Definition of Calendar Expressions ACL-2019 WS-2019

Toward Cross-Domain Engagement Analysis in Medical Notes ACL-2018 WS-2018

Improving Event Coreference Resolution by Modeling Correlations between Event Coreference Chains and Document Topic Structures ACL-2018

Joint Embedding of Words and Labels for Text Classification ACL-2018

Annotation of a Large Clinical Entity Corpus EMNLP-2018

Improving Feature Extraction for Pathology Reports with Precise Negation Scope Detection COLING-2018

emrQA: A Large Corpus for Question Answering on Electronic Medical Records EMNLP-2018

A Treebank for the Healthcare Domain COLING-2018 LAW-2018 WS-2018

Mittens: an Extension of GloVe for Learning Domain-Specialized Representations NAACL-2018

Expert, Crowdsourced, and Machine Assessment of Suicide Risk via Online Postings CLPsych-2018 NAACL-2018 WS-2018

Identifying Risk Factors For Heart Disease in Electronic Medical Records: A Deep Learning Approach ACL-2018 WS-2018

Structured Multi-Label Biomedical Text Tagging via Attentive Neural Tree Decoding EMNLP-2018

Predicting Discharge Disposition Using Patient Complaint Notes in Electronic Medical Records ACL-2018 WS-2018

Revisiting neural relation classification in clinical notes with external information EMNLP-2018 WS-2018

A Framework for Developing and Evaluating Word Embeddings of Drug-named Entity ACL-2018 WS-2018

A FrameNet for Cancer Information in Clinical Narratives: Schema and Annotation LREC-2018

Challenges of Using Text Classifiers for Causal Inference EMNLP-2018

Medical Entity Corpus with PICO elements and Sentiment Analysis LREC-2018

Self-training improves Recurrent Neural Networks performance for Temporal Relation Extraction EMNLP-2018 WS-2018

Listwise temporal ordering of events in clinical notes EMNLP-2018 WS-2018

Sharing Copies of Synthetic Clinical Corpora without Physical Distribution — A Case Study to Get Around IPRs and Privacy Constraints Featuring the German JSYNCC Corpus LREC-2018

Evaluation of a Sequence Tagging Tool for Biomedical Texts EMNLP-2018 WS-2018

Analysis of Risk Factor Domains in Psychosis Patient Health Records EMNLP-2018 WS-2018

Explainable Prediction of Medical Codes from Clinical Text NAACL-2018

WS

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